Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Gm17808-201ENSMUST00000200859 894 ntBASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt88Q9CPR6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Krt88Q9CPR6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Krt88Q9CPR6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Krt88Q9CPR6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Krt88Q9CPR6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Krt88Q9CPR6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Gm4459-201ENSMUST00000118750 468 ntBASIC13.33□□□□□ -0.28
Krt88Q9CPR6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.33□□□□□ -0.28
Krt88Q9CPR6 AA414768-201ENSMUST00000121924 1257 ntBASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Gm43767-201ENSMUST00000198933 381 ntBASIC13.33□□□□□ -0.28
Krt88Q9CPR6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt88Q9CPR6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Gm15165-201ENSMUST00000118140 502 ntBASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms