Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.48□□□□□ -0.09
Trim8Q99PJ2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim8Q99PJ2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Gm7153-201ENSMUST00000117092 455 ntBASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Gm11780-201ENSMUST00000136880 516 ntBASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim8Q99PJ2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim8Q99PJ2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim8Q99PJ2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim8Q99PJ2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trim8Q99PJ2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.46□□□□□ -0.1
Trim8Q99PJ2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim8Q99PJ2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim8Q99PJ2 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms