Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cstf3Q99LI7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cstf3Q99LI7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.27□□□□□ -0.13
Cstf3Q99LI7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cstf3Q99LI7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cstf3Q99LI7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.25□□□□□ -0.13
Cstf3Q99LI7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm18195-201ENSMUST00000207604 706 ntBASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms