Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RtcbQ99LF4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.11■□□□□ 0.49
RtcbQ99LF4 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.11■□□□□ 0.49
RtcbQ99LF4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Gm9726-201ENSMUST00000180321 678 ntBASIC18.11■□□□□ 0.49
RtcbQ99LF4 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.11■□□□□ 0.49
RtcbQ99LF4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Dancr-204ENSMUST00000132389 2347 ntBASIC18.11■□□□□ 0.49
RtcbQ99LF4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RtcbQ99LF4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Gm15460-201ENSMUST00000118147 391 ntBASIC18.1■□□□□ 0.49
RtcbQ99LF4 Gm12341-201ENSMUST00000119724 503 ntBASIC18.1■□□□□ 0.49
RtcbQ99LF4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.1■□□□□ 0.49
RtcbQ99LF4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RtcbQ99LF4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Gm15678-201ENSMUST00000117573 960 ntBASIC18.09■□□□□ 0.49
RtcbQ99LF4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Gm27892-201ENSMUST00000185017 106 ntBASIC18.09■□□□□ 0.49
RtcbQ99LF4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RtcbQ99LF4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RtcbQ99LF4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
RtcbQ99LF4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RtcbQ99LF4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.08■□□□□ 0.48
RtcbQ99LF4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RtcbQ99LF4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RtcbQ99LF4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.08■□□□□ 0.48
RtcbQ99LF4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RtcbQ99LF4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RtcbQ99LF4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RtcbQ99LF4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RtcbQ99LF4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RtcbQ99LF4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RtcbQ99LF4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.07■□□□□ 0.48
RtcbQ99LF4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RtcbQ99LF4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms