Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Gm22189-201ENSMUST00000103822 86 ntBASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd2Q99JR8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm14127-201ENSMUST00000117906 678 ntBASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm9522-201ENSMUST00000182394 926 ntBASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm8515-201ENSMUST00000194852 576 ntBASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm42612-201ENSMUST00000197986 623 ntBASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm6745-201ENSMUST00000199216 526 ntBASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm43170-201ENSMUST00000199827 612 ntBASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd2Q99JR8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Smarcd2Q99JR8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd2Q99JR8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd2Q99JR8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd2Q99JR8 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.83□□□□□ -0.03
Smarcd2Q99JR8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Smarcd2Q99JR8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd2Q99JR8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Gm14042-201ENSMUST00000120139 833 ntBASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Gm6180-201ENSMUST00000065243 498 ntBASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd2Q99JR8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms