Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Gm4875-201ENSMUST00000118257 786 ntBASIC16.95■□□□□ 0.3
Rfc4Q99J62 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc4Q99J62 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.95■□□□□ 0.3
Rfc4Q99J62 Gm6745-201ENSMUST00000199216 526 ntBASIC16.95■□□□□ 0.3
Rfc4Q99J62 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.95■□□□□ 0.3
Rfc4Q99J62 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc4Q99J62 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.94■□□□□ 0.3
Rfc4Q99J62 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc4Q99J62 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm23984-201ENSMUST00000157139 203 ntBASIC16.93■□□□□ 0.3
Rfc4Q99J62 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm8515-201ENSMUST00000194852 576 ntBASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm43703-201ENSMUST00000200523 763 ntBASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm45098-201ENSMUST00000207179 657 ntBASIC16.93■□□□□ 0.3
Rfc4Q99J62 Gm16476-201ENSMUST00000221544 139 ntBASIC16.93■□□□□ 0.3
Rfc4Q99J62 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc4Q99J62 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Gm3436-201ENSMUST00000179930 840 ntBASIC16.92■□□□□ 0.3
Rfc4Q99J62 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.92■□□□□ 0.3
Rfc4Q99J62 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.92■□□□□ 0.3
Rfc4Q99J62 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfc4Q99J62 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms