Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Rubie-203ENSMUST00000227803 2430 ntBASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Efs-202ENSMUST00000227037 2540 ntBASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sf3b5Q923D4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Olfr286-202ENSMUST00000205305 969 ntBASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Sf3b5Q923D4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13□□□□□ -0.33
Sf3b5Q923D4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13□□□□□ -0.33
Sf3b5Q923D4 Gm15483-201ENSMUST00000120338 456 ntBASIC13□□□□□ -0.33
Sf3b5Q923D4 Gm5479-201ENSMUST00000160578 435 ntBASIC13□□□□□ -0.33
Sf3b5Q923D4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13□□□□□ -0.33
Sf3b5Q923D4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Sf3b5Q923D4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Gm27920-201ENSMUST00000183953 96 ntBASIC13□□□□□ -0.33
Sf3b5Q923D4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13□□□□□ -0.33
Sf3b5Q923D4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sf3b5Q923D4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sf3b5Q923D4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms