Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga11Q91XY8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Gm15173-201ENSMUST00000122049 433 ntBASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 AV026068-213ENSMUST00000223675 1171 ntBASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.28□□□□□ -0.12
Pcdhga11Q91XY8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga11Q91XY8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga11Q91XY8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Gm12350-201ENSMUST00000121208 462 ntBASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Mir5126-201ENSMUST00000175513 77 ntBASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga11Q91XY8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga11Q91XY8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms