Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim60Q8VI40 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Birc2-201ENSMUST00000054878 378 ntBASIC15.27■□□□□ 0.04
Trim60Q8VI40 Rps4l-201ENSMUST00000071745 943 ntBASIC15.27■□□□□ 0.04
Trim60Q8VI40 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim60Q8VI40 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim60Q8VI40 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim60Q8VI40 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim60Q8VI40 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Trim60Q8VI40 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
Trim60Q8VI40 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim60Q8VI40 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim60Q8VI40 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Gm7230-201ENSMUST00000173026 815 ntBASIC15.26■□□□□ 0.03
Trim60Q8VI40 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Gm28033-201ENSMUST00000184224 96 ntBASIC15.26■□□□□ 0.03
Trim60Q8VI40 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim60Q8VI40 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.25■□□□□ 0.03
Trim60Q8VI40 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Gm27459-201ENSMUST00000184860 107 ntBASIC15.25■□□□□ 0.03
Trim60Q8VI40 Gm6376-201ENSMUST00000209407 580 ntBASIC15.25■□□□□ 0.03
Trim60Q8VI40 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim60Q8VI40 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms