Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rpa1Q8VEE4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rpa1Q8VEE4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Gm11950-201ENSMUST00000121615 838 ntBASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Gm44454-201ENSMUST00000198541 138 ntBASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rpa1Q8VEE4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Rprl3-201ENSMUST00000157400 290 ntBASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rpa1Q8VEE4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rpa1Q8VEE4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms