Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Top1mtQ8R4U6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Top1mtQ8R4U6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Gm9726-201ENSMUST00000180321 678 ntBASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 AW822252-206ENSMUST00000208904 237 ntBASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Top1mtQ8R4U6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Gm23547-201ENSMUST00000158210 271 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Top1mtQ8R4U6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Mir8117-201ENSMUST00000184773 107 ntBASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top1mtQ8R4U6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Gm11779-201ENSMUST00000118541 368 ntBASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top1mtQ8R4U6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms