Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cd109Q8R422 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC20.76■□□□□ 0.91
Cd109Q8R422 Gm28631-201ENSMUST00000190740 334 ntBASIC20.76■□□□□ 0.91
Cd109Q8R422 Gm45059-201ENSMUST00000205558 1077 ntBASIC20.76■□□□□ 0.91
Cd109Q8R422 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Cd109Q8R422 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cd109Q8R422 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC20.75■□□□□ 0.91
Cd109Q8R422 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Cd109Q8R422 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Gm31326-201ENSMUST00000191856 1048 ntBASIC20.75■□□□□ 0.91
Cd109Q8R422 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cd109Q8R422 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cd109Q8R422 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cd109Q8R422 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Gm15460-201ENSMUST00000118147 391 ntBASIC20.74■□□□□ 0.91
Cd109Q8R422 Gm37917-201ENSMUST00000194711 392 ntBASIC20.74■□□□□ 0.91
Cd109Q8R422 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Gm18018-201ENSMUST00000198273 408 ntBASIC20.74■□□□□ 0.91
Cd109Q8R422 Gm18624-201ENSMUST00000220966 658 ntBASIC20.74■□□□□ 0.91
Cd109Q8R422 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Gm15823-201ENSMUST00000064305 670 ntBASIC20.74■□□□□ 0.91
Cd109Q8R422 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cd109Q8R422 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.74■□□□□ 0.91
Cd109Q8R422 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd109Q8R422 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cd109Q8R422 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC20.73■□□□□ 0.91
Cd109Q8R422 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd109Q8R422 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC20.72■□□□□ 0.91
Cd109Q8R422 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC20.72■□□□□ 0.91
Cd109Q8R422 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC20.72■□□□□ 0.91
Cd109Q8R422 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC20.72■□□□□ 0.91
Cd109Q8R422 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd109Q8R422 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Gm12585-201ENSMUST00000117307 290 ntBASIC20.71■□□□□ 0.91
Cd109Q8R422 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC20.71■□□□□ 0.91
Cd109Q8R422 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC20.71■□□□□ 0.91
Cd109Q8R422 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 AC174678.1-201ENSMUST00000228007 2749 ntBASIC20.71■□□□□ 0.91
Cd109Q8R422 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cd109Q8R422 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd109Q8R422 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms