Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc58Q8R3Q6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc58Q8R3Q6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Gm17808-201ENSMUST00000200859 894 ntBASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Gm18622-201ENSMUST00000219361 595 ntBASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 Celf4-206ENSMUST00000224553 1729 ntBASIC13.25□□□□□ -0.29
Ccdc58Q8R3Q6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Gm29518-201ENSMUST00000190858 372 ntBASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc58Q8R3Q6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms