Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slf1Q8R3P9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.95□□□□□ -0.02
Slf1Q8R3P9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Slf1Q8R3P9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Slf1Q8R3P9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Slf1Q8R3P9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Acot6-202ENSMUST00000222921 3622 ntBASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Slf1Q8R3P9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slf1Q8R3P9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.92□□□□□ -0.02
Slf1Q8R3P9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms