Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Gm16198-201ENSMUST00000118766 670 ntBASIC13.67□□□□□ -0.22
Rfc3Q8R323 Gm13365-201ENSMUST00000121188 973 ntBASIC13.67□□□□□ -0.22
Rfc3Q8R323 Mir1895-201ENSMUST00000122615 79 ntBASIC13.67□□□□□ -0.22
Rfc3Q8R323 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rfc3Q8R323 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.66□□□□□ -0.22
Rfc3Q8R323 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Gm44335-201ENSMUST00000196879 141 ntBASIC13.66□□□□□ -0.22
Rfc3Q8R323 Gm44297-201ENSMUST00000198304 141 ntBASIC13.66□□□□□ -0.22
Rfc3Q8R323 Gm44346-201ENSMUST00000198851 141 ntBASIC13.66□□□□□ -0.22
Rfc3Q8R323 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.66□□□□□ -0.22
Rfc3Q8R323 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rfc3Q8R323 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.65□□□□□ -0.22
Rfc3Q8R323 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Gm20553-201ENSMUST00000204205 844 ntBASIC13.65□□□□□ -0.22
Rfc3Q8R323 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.65□□□□□ -0.22
Rfc3Q8R323 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rfc3Q8R323 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rfc3Q8R323 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rfc3Q8R323 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms