Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.19■□□□□ 0.34
Alx1Q8C8B0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Gm5779-201ENSMUST00000218467 910 ntBASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx1Q8C8B0 Sybu-209ENSMUST00000228639 4113 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm13823-201ENSMUST00000119930 345 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm29310-201ENSMUST00000185468 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21825-201ENSMUST00000185728 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm29109-201ENSMUST00000185895 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21896-201ENSMUST00000186520 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21873-201ENSMUST00000186728 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21794-201ENSMUST00000187056 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21880-201ENSMUST00000187275 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21826-201ENSMUST00000187451 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21198-201ENSMUST00000188393 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21749-201ENSMUST00000189343 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21901-201ENSMUST00000189568 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm29424-201ENSMUST00000189716 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm28599-201ENSMUST00000189838 694 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21867-201ENSMUST00000189917 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm29269-201ENSMUST00000190087 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21722-201ENSMUST00000190153 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm28423-201ENSMUST00000190701 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21899-201ENSMUST00000190745 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21910-201ENSMUST00000191163 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21849-201ENSMUST00000191571 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm28678-201ENSMUST00000191593 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm20910-201ENSMUST00000193268 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm21871-201ENSMUST00000194621 696 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm7774-201ENSMUST00000200064 533 ntBASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx1Q8C8B0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Gm14042-201ENSMUST00000120139 833 ntBASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Gm23547-201ENSMUST00000158210 271 ntBASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Alx1Q8C8B0 Gm25948-201ENSMUST00000175334 112 ntBASIC17.16■□□□□ 0.34
Alx1Q8C8B0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms