Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ska3Q8C263 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ska3Q8C263 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.88□□□□□ -0.19
Ska3Q8C263 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
Ska3Q8C263 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ska3Q8C263 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.87□□□□□ -0.19
Ska3Q8C263 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ska3Q8C263 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.87□□□□□ -0.19
Ska3Q8C263 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.87□□□□□ -0.19
Ska3Q8C263 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.87□□□□□ -0.19
Ska3Q8C263 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ska3Q8C263 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ska3Q8C263 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.87□□□□□ -0.19
Ska3Q8C263 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ska3Q8C263 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ska3Q8C263 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ska3Q8C263 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ska3Q8C263 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ska3Q8C263 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.86□□□□□ -0.19
Ska3Q8C263 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.86□□□□□ -0.19
Ska3Q8C263 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.86□□□□□ -0.19
Ska3Q8C263 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.86□□□□□ -0.19
Ska3Q8C263 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.86□□□□□ -0.19
Ska3Q8C263 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.86□□□□□ -0.19
Ska3Q8C263 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ska3Q8C263 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ska3Q8C263 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska3Q8C263 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska3Q8C263 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ska3Q8C263 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ska3Q8C263 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms