Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nup54Q8BTS4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.09■□□□□ 0.01
Nup54Q8BTS4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.09■□□□□ 0.01
Nup54Q8BTS4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup54Q8BTS4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup54Q8BTS4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Nup54Q8BTS4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup54Q8BTS4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nup54Q8BTS4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup54Q8BTS4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup54Q8BTS4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup54Q8BTS4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup54Q8BTS4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm22065-201ENSMUST00000103753 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm22066-201ENSMUST00000103761 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24932-201ENSMUST00000103763 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24115-201ENSMUST00000103799 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm22190-201ENSMUST00000103827 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm22191-201ENSMUST00000103831 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24721-201ENSMUST00000103849 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm28018-201ENSMUST00000103869 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm26399-201ENSMUST00000103937 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm25349-201ENSMUST00000177728 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm23616-201ENSMUST00000177797 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm25871-201ENSMUST00000177816 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24752-201ENSMUST00000178240 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24496-201ENSMUST00000178287 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm25649-201ENSMUST00000178476 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm25548-201ENSMUST00000178681 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm23147-201ENSMUST00000178841 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm26095-201ENSMUST00000179270 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm22171-201ENSMUST00000179283 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm23936-201ENSMUST00000179354 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm22619-201ENSMUST00000179516 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm25255-201ENSMUST00000179579 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24755-201ENSMUST00000179691 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm26506-201ENSMUST00000179692 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm25086-201ENSMUST00000179931 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm23243-201ENSMUST00000180047 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24659-201ENSMUST00000180212 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm24169-201ENSMUST00000180244 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm23689-201ENSMUST00000180354 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm27359-201ENSMUST00000184153 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm27785-201ENSMUST00000184268 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm27466-201ENSMUST00000184396 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 Gm27703-201ENSMUST00000184836 110 ntBASIC15.08■□□□□ 0
Nup54Q8BTS4 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms