Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Gm27631-201ENSMUST00000184163 466 ntBASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scfd1Q8BRF7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Gm16476-201ENSMUST00000221544 139 ntBASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scfd1Q8BRF7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scfd1Q8BRF7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Mir1897-201ENSMUST00000122581 272 ntBASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Dupd1-202ENSMUST00000224735 548 ntBASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scfd1Q8BRF7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scfd1Q8BRF7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms