Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip4Q8BQP8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rab11fip4Q8BQP8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip4Q8BQP8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rab11fip4Q8BQP8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab11fip4Q8BQP8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Gm27494-201ENSMUST00000184735 189 ntBASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Gm18246-201ENSMUST00000221023 728 ntBASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab11fip4Q8BQP8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Gm5177-201ENSMUST00000183092 997 ntBASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rab11fip4Q8BQP8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Gm15920-201ENSMUST00000118998 402 ntBASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Carlr-201ENSMUST00000181515 2574 ntBASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab11fip4Q8BQP8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rab11fip4Q8BQP8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rab11fip4Q8BQP8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab11fip4Q8BQP8 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.33■□□□□ 0.21
Rab11fip4Q8BQP8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab11fip4Q8BQP8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Gm15427-201ENSMUST00000117288 531 ntBASIC16.33■□□□□ 0.2
Rab11fip4Q8BQP8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms