Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Gm18489-201ENSMUST00000172565 551 ntBASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chmp2bQ8BJF9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Ank2-226ENSMUST00000189368 339 ntBASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp2bQ8BJF9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm5682-201ENSMUST00000173402 505 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm37153-201ENSMUST00000193637 231 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm9682-201ENSMUST00000197505 556 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm6089-201ENSMUST00000197666 938 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp2bQ8BJF9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.11■□□□□ 0.01
Chmp2bQ8BJF9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms