Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.27□□□□□ -0.13
Rnf38Q8BI21 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Gm9682-201ENSMUST00000197505 556 ntBASIC14.26□□□□□ -0.13
Rnf38Q8BI21 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Rps4l-201ENSMUST00000071745 943 ntBASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf38Q8BI21 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Gm18489-201ENSMUST00000172565 551 ntBASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Gm6376-201ENSMUST00000209407 580 ntBASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf38Q8BI21 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Mir8098-201ENSMUST00000184011 137 ntBASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf38Q8BI21 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms