Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank2Q80Z38 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Gm5370-201ENSMUST00000187187 574 ntBASIC18.74■□□□□ 0.59
Shank2Q80Z38 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.74■□□□□ 0.59
Shank2Q80Z38 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Shank2Q80Z38 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Gm12928-201ENSMUST00000117115 573 ntBASIC18.73■□□□□ 0.59
Shank2Q80Z38 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Gm8801-201ENSMUST00000173255 1064 ntBASIC18.73■□□□□ 0.59
Shank2Q80Z38 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.73■□□□□ 0.59
Shank2Q80Z38 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Shank2Q80Z38 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 CU024892.2-201ENSMUST00000224608 832 ntBASIC18.73■□□□□ 0.59
Shank2Q80Z38 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Gm10012-201ENSMUST00000078252 192 ntBASIC18.73■□□□□ 0.59
Shank2Q80Z38 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shank2Q80Z38 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Gm27847-201ENSMUST00000183711 107 ntBASIC18.72■□□□□ 0.59
Shank2Q80Z38 Gm27375-201ENSMUST00000183799 107 ntBASIC18.72■□□□□ 0.59
Shank2Q80Z38 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.72■□□□□ 0.59
Shank2Q80Z38 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shank2Q80Z38 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm9726-201ENSMUST00000180321 678 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm19078-201ENSMUST00000206311 727 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Prob1-201ENSMUST00000097619 3021 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Rn7s1-201ENSMUST00000174924 300 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Rn7s2-201ENSMUST00000175032 300 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm26461-201ENSMUST00000175064 290 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm4804-201ENSMUST00000182234 999 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gm6013-201ENSMUST00000212264 699 ntBASIC18.71■□□□□ 0.59
Shank2Q80Z38 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank2Q80Z38 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Shank2Q80Z38 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank2Q80Z38 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank2Q80Z38 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.7■□□□□ 0.58
Shank2Q80Z38 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank2Q80Z38 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shank2Q80Z38 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shank2Q80Z38 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shank2Q80Z38 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.7■□□□□ 0.58
Shank2Q80Z38 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shank2Q80Z38 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms