Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Gm27631-201ENSMUST00000184163 466 ntBASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp6nlQ80XC3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Gm2451-201ENSMUST00000199447 999 ntBASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Gm10290-201ENSMUST00000200451 999 ntBASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp6nlQ80XC3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Gm22189-201ENSMUST00000103822 86 ntBASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Gm6222-201ENSMUST00000120787 396 ntBASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp6nlQ80XC3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Gm8749-201ENSMUST00000117737 331 ntBASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Gm3436-201ENSMUST00000179930 840 ntBASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Gm28631-201ENSMUST00000190740 334 ntBASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp6nlQ80XC3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms