Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Srrm3Q80WV7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Gm14494-201ENSMUST00000118786 435 ntBASIC15.37■□□□□ 0.05
Srrm3Q80WV7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Gm19164-201ENSMUST00000210667 640 ntBASIC15.37■□□□□ 0.05
Srrm3Q80WV7 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.37■□□□□ 0.05
Srrm3Q80WV7 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Srrm3Q80WV7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.36■□□□□ 0.05
Srrm3Q80WV7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Gm4995-201ENSMUST00000117247 432 ntBASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Srrm3Q80WV7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms