Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim62Q80V85 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim62Q80V85 Mir6990-201ENSMUST00000183724 91 ntBASIC15.26■□□□□ 0.03
Trim62Q80V85 Gm38225-201ENSMUST00000194001 393 ntBASIC15.26■□□□□ 0.03
Trim62Q80V85 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.26■□□□□ 0.03
Trim62Q80V85 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.26■□□□□ 0.03
Trim62Q80V85 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim62Q80V85 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim62Q80V85 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trim62Q80V85 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim62Q80V85 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim62Q80V85 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim62Q80V85 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim62Q80V85 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Gm23935-201ENSMUST00000102303 57 ntBASIC15.25■□□□□ 0.03
Trim62Q80V85 Gm24270-201ENSMUST00000102326 57 ntBASIC15.25■□□□□ 0.03
Trim62Q80V85 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim62Q80V85 Gm24245-201ENSMUST00000157318 57 ntBASIC15.25■□□□□ 0.03
Trim62Q80V85 Gm5479-201ENSMUST00000160578 435 ntBASIC15.25■□□□□ 0.03
Trim62Q80V85 Olfr286-202ENSMUST00000205305 969 ntBASIC15.25■□□□□ 0.03
Trim62Q80V85 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim62Q80V85 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim62Q80V85 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.24■□□□□ 0.03
Trim62Q80V85 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.24■□□□□ 0.03
Trim62Q80V85 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim62Q80V85 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim62Q80V85 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.23■□□□□ 0.03
Trim62Q80V85 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim62Q80V85 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim62Q80V85 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms