Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1gQ80T11 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Gm6888-201ENSMUST00000221983 706 ntBASIC16.13■□□□□ 0.17
Ush1gQ80T11 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.13■□□□□ 0.17
Ush1gQ80T11 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ush1gQ80T11 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Gm43438-201ENSMUST00000198133 379 ntBASIC16.12■□□□□ 0.17
Ush1gQ80T11 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ush1gQ80T11 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.11■□□□□ 0.17
Ush1gQ80T11 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.11■□□□□ 0.17
Ush1gQ80T11 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.11■□□□□ 0.17
Ush1gQ80T11 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms