Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Gm25990-201ENSMUST00000102440 86 ntBASIC12.41□□□□□ -0.42
Smim12Q78RX3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Gm13418-201ENSMUST00000119097 944 ntBASIC12.41□□□□□ -0.42
Smim12Q78RX3 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.41□□□□□ -0.42
Smim12Q78RX3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.41□□□□□ -0.42
Smim12Q78RX3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim12Q78RX3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Gm8749-201ENSMUST00000117737 331 ntBASIC12.4□□□□□ -0.42
Smim12Q78RX3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Mir7071-201ENSMUST00000184847 69 ntBASIC12.4□□□□□ -0.42
Smim12Q78RX3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim12Q78RX3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.4□□□□□ -0.43
Smim12Q78RX3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Smim12Q78RX3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.4□□□□□ -0.43
Smim12Q78RX3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smim12Q78RX3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.39□□□□□ -0.43
Smim12Q78RX3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Gm5682-201ENSMUST00000173402 505 ntBASIC12.39□□□□□ -0.43
Smim12Q78RX3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim12Q78RX3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms