Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm15487-201ENSMUST00000122373 465 ntBASIC16.12■□□□□ 0.17
Smchd1Q6P5D8 Gm29667-201ENSMUST00000190817 490 ntBASIC16.12■□□□□ 0.17
Smchd1Q6P5D8 Gm43438-201ENSMUST00000198133 379 ntBASIC16.12■□□□□ 0.17
Smchd1Q6P5D8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smchd1Q6P5D8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smchd1Q6P5D8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.12■□□□□ 0.17
Smchd1Q6P5D8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smchd1Q6P5D8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Gm14767-201ENSMUST00000121559 586 ntBASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Gm27989-201ENSMUST00000184721 107 ntBASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Gm42612-201ENSMUST00000197986 623 ntBASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Gm43170-201ENSMUST00000199827 612 ntBASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smchd1Q6P5D8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gm22189-201ENSMUST00000103822 86 ntBASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gm44855-201ENSMUST00000205725 362 ntBASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smchd1Q6P5D8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smchd1Q6P5D8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms