Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Mir8102-201ENSMUST00000184148 139 ntBASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Gm44344-201ENSMUST00000200287 129 ntBASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Gm7775-201ENSMUST00000218871 853 ntBASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Krt40Q6IFX3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Gm12428-201ENSMUST00000119844 727 ntBASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Mir7684-201ENSMUST00000183858 60 ntBASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Gm27321-201ENSMUST00000185021 205 ntBASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Gm7063-201ENSMUST00000186840 981 ntBASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Gm16476-201ENSMUST00000221544 139 ntBASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Krt40Q6IFX3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.29■□□□□ 0.36
Krt40Q6IFX3 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.29■□□□□ 0.36
Krt40Q6IFX3 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Krt40Q6IFX3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Gm45453-201ENSMUST00000211758 853 ntBASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Dupd1-202ENSMUST00000224735 548 ntBASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Krt40Q6IFX3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Krt40Q6IFX3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms