Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm27701-201ENSMUST00000184498 110 ntBASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Gm19220-201ENSMUST00000222682 803 ntBASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.15■□□□□ 0.34
Scaf8Q6DID3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf8Q6DID3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scaf8Q6DID3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scaf8Q6DID3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Gm13392-201ENSMUST00000117708 150 ntBASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Gm6916-202ENSMUST00000205523 195 ntBASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Olfr582-201ENSMUST00000098212 960 ntBASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf8Q6DID3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scaf8Q6DID3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scaf8Q6DID3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.11■□□□□ 0.33
Scaf8Q6DID3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms