Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.94□□□□□ -0.5
Col7a1Q63870 Gm7046-201ENSMUST00000221351 977 ntBASIC11.94□□□□□ -0.5
Col7a1Q63870 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col7a1Q63870 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Gm10752-201ENSMUST00000218348 729 ntBASIC11.94□□□□□ -0.5
Col7a1Q63870 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col7a1Q63870 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.94□□□□□ -0.5
Col7a1Q63870 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col7a1Q63870 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col7a1Q63870 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col7a1Q63870 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm42997-202ENSMUST00000200321 985 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm44545-201ENSMUST00000208262 746 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col7a1Q63870 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col7a1Q63870 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col7a1Q63870 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm23200-201ENSMUST00000104379 132 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm6023-201ENSMUST00000118217 606 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.93□□□□□ -0.5
Col7a1Q63870 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm13464-201ENSMUST00000119418 935 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Mir1943-201ENSMUST00000158276 73 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Gm43378-201ENSMUST00000199336 582 ntBASIC11.93□□□□□ -0.5
Col7a1Q63870 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col7a1Q63870 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col7a1Q63870 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.92□□□□□ -0.5
Col7a1Q63870 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.92□□□□□ -0.5
Col7a1Q63870 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.92□□□□□ -0.5
Col7a1Q63870 Gm12566-201ENSMUST00000121479 359 ntBASIC11.92□□□□□ -0.5
Col7a1Q63870 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Gm8810-201ENSMUST00000172895 754 ntBASIC11.92□□□□□ -0.5
Col7a1Q63870 Gm3508-201ENSMUST00000186012 792 ntBASIC11.92□□□□□ -0.5
Col7a1Q63870 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col7a1Q63870 Gm18584-201ENSMUST00000203098 964 ntBASIC11.92□□□□□ -0.5
Col7a1Q63870 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.92□□□□□ -0.5
Col7a1Q63870 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.92□□□□□ -0.5
Col7a1Q63870 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.92□□□□□ -0.5
Col7a1Q63870 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col7a1Q63870 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col7a1Q63870 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms