Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SspnQ62147 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SspnQ62147 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.37□□□□□ -0.43
SspnQ62147 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SspnQ62147 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SspnQ62147 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.36□□□□□ -0.43
SspnQ62147 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.36□□□□□ -0.43
SspnQ62147 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SspnQ62147 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SspnQ62147 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.36□□□□□ -0.43
SspnQ62147 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.36□□□□□ -0.43
SspnQ62147 Gm7153-201ENSMUST00000117092 455 ntBASIC12.36□□□□□ -0.43
SspnQ62147 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.36□□□□□ -0.43
SspnQ62147 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.36□□□□□ -0.43
SspnQ62147 Gm17971-201ENSMUST00000190239 806 ntBASIC12.36□□□□□ -0.43
SspnQ62147 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.36□□□□□ -0.43
SspnQ62147 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SspnQ62147 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.36□□□□□ -0.43
SspnQ62147 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SspnQ62147 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.35□□□□□ -0.43
SspnQ62147 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
SspnQ62147 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.35□□□□□ -0.43
SspnQ62147 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.35□□□□□ -0.43
SspnQ62147 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.35□□□□□ -0.43
SspnQ62147 Gm7230-201ENSMUST00000173026 815 ntBASIC12.35□□□□□ -0.43
SspnQ62147 Gm5682-201ENSMUST00000173402 505 ntBASIC12.35□□□□□ -0.43
SspnQ62147 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SspnQ62147 Gm6550-201ENSMUST00000187574 993 ntBASIC12.35□□□□□ -0.43
SspnQ62147 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.35□□□□□ -0.43
SspnQ62147 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.35□□□□□ -0.43
SspnQ62147 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.35□□□□□ -0.43
SspnQ62147 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms