Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ecm1Q61508 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.25■□□□□ 0.19
Ecm1Q61508 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ecm1Q61508 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.25■□□□□ 0.19
Ecm1Q61508 Gm18624-201ENSMUST00000220966 658 ntBASIC16.25■□□□□ 0.19
Ecm1Q61508 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ecm1Q61508 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ecm1Q61508 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ecm1Q61508 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.25■□□□□ 0.19
Ecm1Q61508 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ecm1Q61508 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ecm1Q61508 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Gm12585-201ENSMUST00000117307 290 ntBASIC16.24■□□□□ 0.19
Ecm1Q61508 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.24■□□□□ 0.19
Ecm1Q61508 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.24■□□□□ 0.19
Ecm1Q61508 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.24■□□□□ 0.19
Ecm1Q61508 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Ecm1Q61508 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Ecm1Q61508 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.24■□□□□ 0.19
Ecm1Q61508 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ecm1Q61508 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ecm1Q61508 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Gm10275-202ENSMUST00000168697 495 ntBASIC16.23■□□□□ 0.19
Ecm1Q61508 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.23■□□□□ 0.19
Ecm1Q61508 Gm33320-201ENSMUST00000192232 530 ntBASIC16.23■□□□□ 0.19
Ecm1Q61508 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Gm10275-201ENSMUST00000092620 635 ntBASIC16.23■□□□□ 0.19
Ecm1Q61508 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.23■□□□□ 0.19
Ecm1Q61508 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ecm1Q61508 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.22■□□□□ 0.19
Ecm1Q61508 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Ecm1Q61508 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.22■□□□□ 0.19
Ecm1Q61508 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ecm1Q61508 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ecm1Q61508 Gm25857-201ENSMUST00000082788 129 ntBASIC16.22■□□□□ 0.19
Ecm1Q61508 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.22■□□□□ 0.19
Ecm1Q61508 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.22■□□□□ 0.19
Ecm1Q61508 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ecm1Q61508 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ecm1Q61508 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.21■□□□□ 0.19
Ecm1Q61508 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.21■□□□□ 0.19
Ecm1Q61508 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ecm1Q61508 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.21■□□□□ 0.19
Ecm1Q61508 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.21■□□□□ 0.19
Ecm1Q61508 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.21■□□□□ 0.19
Ecm1Q61508 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms