Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vsx2Q61412 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Mir8117-201ENSMUST00000184773 107 ntBASIC14.4□□□□□ -0.1
Vsx2Q61412 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.4□□□□□ -0.1
Vsx2Q61412 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vsx2Q61412 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx2Q61412 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vsx2Q61412 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vsx2Q61412 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Vsx2Q61412 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.38□□□□□ -0.11
Vsx2Q61412 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Gm37935-201ENSMUST00000192012 982 ntBASIC14.38□□□□□ -0.11
Vsx2Q61412 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vsx2Q61412 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vsx2Q61412 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vsx2Q61412 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vsx2Q61412 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.37□□□□□ -0.11
Vsx2Q61412 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms