Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.02■□□□□ 0.32
Foxd1Q61345 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxd1Q61345 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Foxd1Q61345 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Foxd1Q61345 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxd1Q61345 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxd1Q61345 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxd1Q61345 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxd1Q61345 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Foxd1Q61345 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxd1Q61345 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxd1Q61345 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17.01■□□□□ 0.31
Foxd1Q61345 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.01■□□□□ 0.31
Foxd1Q61345 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.01■□□□□ 0.31
Foxd1Q61345 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.01■□□□□ 0.31
Foxd1Q61345 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.01■□□□□ 0.31
Foxd1Q61345 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.01■□□□□ 0.31
Foxd1Q61345 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.01■□□□□ 0.31
Foxd1Q61345 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Foxd1Q61345 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxd1Q61345 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17■□□□□ 0.31
Foxd1Q61345 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Foxd1Q61345 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17■□□□□ 0.31
Foxd1Q61345 Gm27243-201ENSMUST00000183964 521 ntBASIC17■□□□□ 0.31
Foxd1Q61345 Gm29667-201ENSMUST00000190817 490 ntBASIC17■□□□□ 0.31
Foxd1Q61345 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Gm18246-201ENSMUST00000221023 728 ntBASIC17■□□□□ 0.31
Foxd1Q61345 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17■□□□□ 0.31
Foxd1Q61345 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Foxd1Q61345 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
Foxd1Q61345 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Foxd1Q61345 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Foxd1Q61345 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Foxd1Q61345 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Foxd1Q61345 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.99■□□□□ 0.31
Foxd1Q61345 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Foxd1Q61345 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Foxd1Q61345 Gm37714-201ENSMUST00000194742 342 ntBASIC16.99■□□□□ 0.31
Foxd1Q61345 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.99■□□□□ 0.31
Foxd1Q61345 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 AU022133-201ENSMUST00000200601 873 ntBASIC16.99■□□□□ 0.31
Foxd1Q61345 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Foxd1Q61345 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.99■□□□□ 0.31
Foxd1Q61345 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.99■□□□□ 0.31
Foxd1Q61345 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.99■□□□□ 0.31
Foxd1Q61345 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Foxd1Q61345 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxd1Q61345 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Foxd1Q61345 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Gm13461-201ENSMUST00000120980 662 ntBASIC16.98■□□□□ 0.31
Foxd1Q61345 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.98■□□□□ 0.31
Foxd1Q61345 Gm43830-201ENSMUST00000198760 1067 ntBASIC16.98■□□□□ 0.31
Foxd1Q61345 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.98■□□□□ 0.31
Foxd1Q61345 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.98■□□□□ 0.31
Foxd1Q61345 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Foxd1Q61345 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxd1Q61345 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Foxd1Q61345 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms