Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Clns1aQ61189 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.65□□□□□ -0.38
Clns1aQ61189 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.65□□□□□ -0.38
Clns1aQ61189 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.65□□□□□ -0.38
Clns1aQ61189 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.65□□□□□ -0.38
Clns1aQ61189 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clns1aQ61189 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Clns1aQ61189 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Clns1aQ61189 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clns1aQ61189 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Clns1aQ61189 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clns1aQ61189 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Clns1aQ61189 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.64□□□□□ -0.39
Clns1aQ61189 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.64□□□□□ -0.39
Clns1aQ61189 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clns1aQ61189 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.63□□□□□ -0.39
Clns1aQ61189 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Clns1aQ61189 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.63□□□□□ -0.39
Clns1aQ61189 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.63□□□□□ -0.39
Clns1aQ61189 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.63□□□□□ -0.39
Clns1aQ61189 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Clns1aQ61189 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clns1aQ61189 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clns1aQ61189 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Clns1aQ61189 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.62□□□□□ -0.39
Clns1aQ61189 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.62□□□□□ -0.39
Clns1aQ61189 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clns1aQ61189 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms