Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.29■□□□□ 0.04
Foxd4Q60688 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.29■□□□□ 0.04
Foxd4Q60688 CT025561.1-201ENSMUST00000214972 674 ntBASIC15.29■□□□□ 0.04
Foxd4Q60688 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.29■□□□□ 0.04
Foxd4Q60688 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.29■□□□□ 0.04
Foxd4Q60688 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Rps4l-201ENSMUST00000071745 943 ntBASIC15.29■□□□□ 0.04
Foxd4Q60688 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxd4Q60688 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Foxd4Q60688 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Gm25509-201ENSMUST00000116985 106 ntBASIC15.28■□□□□ 0.04
Foxd4Q60688 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.28■□□□□ 0.04
Foxd4Q60688 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Gm28975-201ENSMUST00000186412 686 ntBASIC15.28■□□□□ 0.04
Foxd4Q60688 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Foxd4Q60688 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC15.28■□□□□ 0.04
Foxd4Q60688 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxd4Q60688 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Foxd4Q60688 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.27■□□□□ 0.04
Foxd4Q60688 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm22119-201ENSMUST00000175594 99 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Foxd4Q60688 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.27■□□□□ 0.04
Foxd4Q60688 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44357-201ENSMUST00000195897 142 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm19658-201ENSMUST00000196231 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44367-201ENSMUST00000196836 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44350-201ENSMUST00000197197 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44390-201ENSMUST00000197533 144 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44313-201ENSMUST00000198018 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44486-201ENSMUST00000198508 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44314-201ENSMUST00000199263 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44394-201ENSMUST00000199558 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44484-201ENSMUST00000199873 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44466-201ENSMUST00000200264 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm44359-201ENSMUST00000200671 138 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.27■□□□□ 0.04
Foxd4Q60688 AC154757.2-201ENSMUST00000228885 743 ntBASIC15.27■□□□□ 0.04
Foxd4Q60688 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxd4Q60688 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxd4Q60688 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxd4Q60688 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Foxd4Q60688 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Foxd4Q60688 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms