Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Ccdc88aQ5SNZ0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc88aQ5SNZ0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc88aQ5SNZ0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc88aQ5SNZ0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc88aQ5SNZ0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc88aQ5SNZ0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc88aQ5SNZ0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm8602-201ENSMUST00000184045 607 ntBASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc88aQ5SNZ0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm45668-201ENSMUST00000211271 493 ntBASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc88aQ5SNZ0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm18766-201ENSMUST00000189811 808 ntBASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc88aQ5SNZ0 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.8■□□□□ 0.28
Ccdc88aQ5SNZ0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.8■□□□□ 0.28
Ccdc88aQ5SNZ0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms