Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5d-4Q5R1F6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5d-4Q5R1F6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Gm18733-201ENSMUST00000173950 856 ntBASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5d-4Q5R1F6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms