Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Gm12882-201ENSMUST00000121696 517 ntBASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Gm15429-201ENSMUST00000151268 798 ntBASIC18.04■□□□□ 0.48
Shank3Q4ACU6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shank3Q4ACU6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Gm15957-201ENSMUST00000118893 974 ntBASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Gm29127-201ENSMUST00000188304 517 ntBASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Gm43179-201ENSMUST00000198797 275 ntBASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shank3Q4ACU6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Gm4959-201ENSMUST00000197271 1044 ntBASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.02■□□□□ 0.48
Shank3Q4ACU6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shank3Q4ACU6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shank3Q4ACU6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm27731-201ENSMUST00000185192 107 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm7287-201ENSMUST00000205267 602 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm44608-201ENSMUST00000206827 855 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 CT485787.1-201ENSMUST00000225617 968 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm6091-201ENSMUST00000098307 165 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shank3Q4ACU6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms