Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf223Q3UV31 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf223Q3UV31 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Gm8410-201ENSMUST00000117225 605 ntBASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Gm13223-201ENSMUST00000118609 747 ntBASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Gm13823-201ENSMUST00000119930 345 ntBASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Gm27622-201ENSMUST00000183779 60 ntBASIC14.3□□□□□ -0.12
Rnf223Q3UV31 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Gm20949-201ENSMUST00000206478 952 ntBASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf223Q3UV31 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf223Q3UV31 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Gm28630-201ENSMUST00000187806 498 ntBASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Gm37230-201ENSMUST00000194491 818 ntBASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Efs-202ENSMUST00000227037 2540 ntBASIC14.28□□□□□ -0.12
Rnf223Q3UV31 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf223Q3UV31 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms