Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
PrkdcP97313 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.87□□□□□ -0.83
PrkdcP97313 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
PrkdcP97313 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
PrkdcP97313 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
PrkdcP97313 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
PrkdcP97313 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Gm13786-201ENSMUST00000122371 333 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Gm43094-201ENSMUST00000196549 921 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
PrkdcP97313 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC9.86□□□□□ -0.83
PrkdcP97313 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC9.86□□□□□ -0.83
PrkdcP97313 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC9.86□□□□□ -0.83
PrkdcP97313 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
PrkdcP97313 Celf4-206ENSMUST00000224553 1729 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC9.86□□□□□ -0.83
PrkdcP97313 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Gm6621-201ENSMUST00000193251 772 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 Gm38671-201ENSMUST00000200573 130 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.86□□□□□ -0.83
PrkdcP97313 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
PrkdcP97313 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
PrkdcP97313 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.85□□□□□ -0.83
PrkdcP97313 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.85□□□□□ -0.83
PrkdcP97313 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
PrkdcP97313 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Gm8959-201ENSMUST00000213150 571 ntBASIC9.85□□□□□ -0.83
PrkdcP97313 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
PrkdcP97313 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.85□□□□□ -0.83
PrkdcP97313 Gm26927-201ENSMUST00000182385 965 ntBASIC9.85□□□□□ -0.83
PrkdcP97313 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.85□□□□□ -0.83
PrkdcP97313 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC9.85□□□□□ -0.83
PrkdcP97313 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
PrkdcP97313 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Gm8805-201ENSMUST00000117848 313 ntBASIC9.84□□□□□ -0.83
PrkdcP97313 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.84□□□□□ -0.83
PrkdcP97313 Gm42627-201ENSMUST00000197347 224 ntBASIC9.84□□□□□ -0.83
PrkdcP97313 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC9.84□□□□□ -0.83
PrkdcP97313 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.84□□□□□ -0.83
PrkdcP97313 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC9.84□□□□□ -0.83
PrkdcP97313 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC9.84□□□□□ -0.83
PrkdcP97313 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
PrkdcP97313 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms