Protein–RNA interactions for Protein: P62878

Rbx1, E3 ubiquitin-protein ligase RBX1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbx1P62878 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rbx1P62878 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rbx1P62878 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rbx1P62878 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.93□□□□□ -0.66
Rbx1P62878 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Rbx1P62878 Gm10231-201ENSMUST00000181584 441 ntBASIC10.93□□□□□ -0.66
Rbx1P62878 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.93□□□□□ -0.66
Rbx1P62878 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.93□□□□□ -0.66
Rbx1P62878 Gm10175-202ENSMUST00000208752 441 ntBASIC10.93□□□□□ -0.66
Rbx1P62878 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.93□□□□□ -0.66
Rbx1P62878 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rbx1P62878 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rbx1P62878 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.92□□□□□ -0.66
Rbx1P62878 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Rbx1P62878 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Rbx1P62878 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rbx1P62878 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rbx1P62878 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rbx1P62878 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.92□□□□□ -0.66
Rbx1P62878 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.92□□□□□ -0.66
Rbx1P62878 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Rbx1P62878 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Gm5587-201ENSMUST00000206270 674 ntBASIC10.92□□□□□ -0.66
Rbx1P62878 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.92□□□□□ -0.66
Rbx1P62878 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.92□□□□□ -0.66
Rbx1P62878 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.92□□□□□ -0.66
Rbx1P62878 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.92□□□□□ -0.66
Rbx1P62878 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.92□□□□□ -0.66
Rbx1P62878 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rbx1P62878 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rbx1P62878 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.92□□□□□ -0.66
Rbx1P62878 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rbx1P62878 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rbx1P62878 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rbx1P62878 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms