Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lsm3P62311 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lsm3P62311 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lsm3P62311 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm3P62311 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Gm14722-201ENSMUST00000118943 689 ntBASIC13.47□□□□□ -0.25
Lsm3P62311 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Lsm3P62311 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Lsm3P62311 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Lsm3P62311 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm3P62311 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.47□□□□□ -0.25
Lsm3P62311 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm3P62311 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm3P62311 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Lsm3P62311 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm3P62311 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.46□□□□□ -0.25
Lsm3P62311 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Gm2274-201ENSMUST00000184539 609 ntBASIC13.46□□□□□ -0.25
Lsm3P62311 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm3P62311 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.46□□□□□ -0.25
Lsm3P62311 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.46□□□□□ -0.25
Lsm3P62311 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lsm3P62311 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm3P62311 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm3P62311 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm3P62311 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm3P62311 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm3P62311 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm3P62311 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.46□□□□□ -0.26
Lsm3P62311 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Lsm3P62311 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Lsm3P62311 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lsm3P62311 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lsm3P62311 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Lsm3P62311 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Lsm3P62311 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.45□□□□□ -0.26
Lsm3P62311 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Celf4-206ENSMUST00000224553 1729 ntBASIC13.45□□□□□ -0.26
Lsm3P62311 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Gm715-201ENSMUST00000117865 831 ntBASIC13.45□□□□□ -0.26
Lsm3P62311 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.45□□□□□ -0.26
Lsm3P62311 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lsm3P62311 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.45□□□□□ -0.26
Lsm3P62311 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms