Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Gm6089-201ENSMUST00000197666 938 ntBASIC13.02□□□□□ -0.33
Sec61a1P61620 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.02□□□□□ -0.33
Sec61a1P61620 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.02□□□□□ -0.33
Sec61a1P61620 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sec61a1P61620 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Sec61a1P61620 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Gm12350-201ENSMUST00000121208 462 ntBASIC13.01□□□□□ -0.33
Sec61a1P61620 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.01□□□□□ -0.33
Sec61a1P61620 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.01□□□□□ -0.33
Sec61a1P61620 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sec61a1P61620 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sec61a1P61620 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sec61a1P61620 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13□□□□□ -0.33
Sec61a1P61620 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sec61a1P61620 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sec61a1P61620 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Gm37500-201ENSMUST00000192059 1443 ntBASIC13□□□□□ -0.33
Sec61a1P61620 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Sec61a1P61620 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13□□□□□ -0.33
Sec61a1P61620 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13□□□□□ -0.33
Sec61a1P61620 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Mir5126-201ENSMUST00000175513 77 ntBASIC13□□□□□ -0.33
Sec61a1P61620 Gm43514-201ENSMUST00000198852 424 ntBASIC13□□□□□ -0.33
Sec61a1P61620 AC127302.2-201ENSMUST00000215212 268 ntBASIC13□□□□□ -0.33
Sec61a1P61620 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13□□□□□ -0.33
Sec61a1P61620 AC154757.1-201ENSMUST00000228289 336 ntBASIC13□□□□□ -0.33
Sec61a1P61620 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sec61a1P61620 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13□□□□□ -0.33
Sec61a1P61620 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sec61a1P61620 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sec61a1P61620 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms