Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Gm7461-201ENSMUST00000058918 827 ntBASIC16.66■□□□□ 0.26
Rrp1P56183 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rrp1P56183 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp1P56183 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.65■□□□□ 0.26
Rrp1P56183 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rrp1P56183 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.65■□□□□ 0.26
Rrp1P56183 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Gm34391-201ENSMUST00000203706 907 ntBASIC16.65■□□□□ 0.26
Rrp1P56183 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rrp1P56183 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rrp1P56183 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rrp1P56183 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp1P56183 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Rrp1P56183 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rrp1P56183 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Rrp1P56183 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rrp1P56183 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.64■□□□□ 0.26
Rrp1P56183 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.64■□□□□ 0.25
Rrp1P56183 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.64■□□□□ 0.25
Rrp1P56183 Birc2-201ENSMUST00000054878 378 ntBASIC16.64■□□□□ 0.25
Rrp1P56183 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.64■□□□□ 0.25
Rrp1P56183 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp1P56183 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rrp1P56183 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.63■□□□□ 0.25
Rrp1P56183 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.63■□□□□ 0.25
Rrp1P56183 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rrp1P56183 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Rrp1P56183 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.63■□□□□ 0.25
Rrp1P56183 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rrp1P56183 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Rrp1P56183 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.63■□□□□ 0.25
Rrp1P56183 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrp1P56183 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp1P56183 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rrp1P56183 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp1P56183 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rrp1P56183 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp1P56183 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.62■□□□□ 0.25
Rrp1P56183 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rrp1P56183 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp1P56183 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp1P56183 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrp1P56183 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms