Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacnb3P54285 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacnb3P54285 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacnb3P54285 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacnb3P54285 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cacnb3P54285 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cacnb3P54285 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cacnb3P54285 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cacnb3P54285 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.15■□□□□ 0.34
Cacnb3P54285 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.15■□□□□ 0.34
Cacnb3P54285 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.15■□□□□ 0.34
Cacnb3P54285 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cacnb3P54285 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cacnb3P54285 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cacnb3P54285 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm8749-201ENSMUST00000117737 331 ntBASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm23984-201ENSMUST00000157139 203 ntBASIC17.14■□□□□ 0.33
Cacnb3P54285 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm37230-201ENSMUST00000194491 818 ntBASIC17.14■□□□□ 0.33
Cacnb3P54285 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.14■□□□□ 0.33
Cacnb3P54285 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm20445-201ENSMUST00000061905 565 ntBASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.14■□□□□ 0.33
Cacnb3P54285 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.14■□□□□ 0.33
Cacnb3P54285 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.14■□□□□ 0.33
Cacnb3P54285 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cacnb3P54285 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Cacnb3P54285 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Gm14042-201ENSMUST00000120139 833 ntBASIC17.13■□□□□ 0.33
Cacnb3P54285 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Gm9522-201ENSMUST00000182394 926 ntBASIC17.13■□□□□ 0.33
Cacnb3P54285 Gm42612-201ENSMUST00000197986 623 ntBASIC17.13■□□□□ 0.33
Cacnb3P54285 Gm43170-201ENSMUST00000199827 612 ntBASIC17.13■□□□□ 0.33
Cacnb3P54285 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Gm45453-201ENSMUST00000211758 853 ntBASIC17.13■□□□□ 0.33
Cacnb3P54285 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cacnb3P54285 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.13■□□□□ 0.33
Cacnb3P54285 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.13■□□□□ 0.33
Cacnb3P54285 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cacnb3P54285 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cacnb3P54285 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb3P54285 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb3P54285 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb3P54285 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.12■□□□□ 0.33
Cacnb3P54285 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb3P54285 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cacnb3P54285 Gm14127-201ENSMUST00000117906 678 ntBASIC17.12■□□□□ 0.33
Cacnb3P54285 Gm15653-201ENSMUST00000119247 907 ntBASIC17.12■□□□□ 0.33
Cacnb3P54285 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.12■□□□□ 0.33
Cacnb3P54285 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms