Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LtbrP50284 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LtbrP50284 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LtbrP50284 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LtbrP50284 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
LtbrP50284 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.31■□□□□ 0.36
LtbrP50284 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LtbrP50284 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.3■□□□□ 0.36
LtbrP50284 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.3■□□□□ 0.36
LtbrP50284 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LtbrP50284 Gm17150-201ENSMUST00000165577 381 ntBASIC17.3■□□□□ 0.36
LtbrP50284 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.3■□□□□ 0.36
LtbrP50284 AY702102-202ENSMUST00000194651 1173 ntBASIC17.3■□□□□ 0.36
LtbrP50284 Gm42612-201ENSMUST00000197986 623 ntBASIC17.3■□□□□ 0.36
LtbrP50284 Gm43170-201ENSMUST00000199827 612 ntBASIC17.3■□□□□ 0.36
LtbrP50284 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LtbrP50284 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.3■□□□□ 0.36
LtbrP50284 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LtbrP50284 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.3■□□□□ 0.36
LtbrP50284 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LtbrP50284 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
LtbrP50284 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LtbrP50284 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.29■□□□□ 0.36
LtbrP50284 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.29■□□□□ 0.36
LtbrP50284 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.29■□□□□ 0.36
LtbrP50284 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LtbrP50284 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.29■□□□□ 0.36
LtbrP50284 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LtbrP50284 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LtbrP50284 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.28■□□□□ 0.36
LtbrP50284 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Gm22189-201ENSMUST00000103822 86 ntBASIC17.28■□□□□ 0.36
LtbrP50284 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LtbrP50284 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.28■□□□□ 0.36
LtbrP50284 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.28■□□□□ 0.36
LtbrP50284 Shd-206ENSMUST00000225145 998 ntBASIC17.28■□□□□ 0.36
LtbrP50284 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.28■□□□□ 0.36
LtbrP50284 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.28■□□□□ 0.36
LtbrP50284 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LtbrP50284 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LtbrP50284 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LtbrP50284 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LtbrP50284 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.27■□□□□ 0.36
LtbrP50284 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LtbrP50284 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LtbrP50284 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LtbrP50284 Gm24543-201ENSMUST00000103867 82 ntBASIC17.27■□□□□ 0.36
LtbrP50284 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LtbrP50284 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.27■□□□□ 0.36
LtbrP50284 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.27■□□□□ 0.36
LtbrP50284 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.27■□□□□ 0.36
LtbrP50284 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
LtbrP50284 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.27■□□□□ 0.36
LtbrP50284 AC132260.2-201ENSMUST00000224482 344 ntBASIC17.27■□□□□ 0.36
LtbrP50284 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LtbrP50284 Gm20445-201ENSMUST00000061905 565 ntBASIC17.27■□□□□ 0.36
LtbrP50284 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LtbrP50284 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LtbrP50284 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LtbrP50284 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LtbrP50284 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LtbrP50284 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LtbrP50284 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LtbrP50284 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LtbrP50284 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms