Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Slc6a1P31648 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a1P31648 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Slc6a1P31648 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.71□□□□□ -0.37
Slc6a1P31648 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Slc6a1P31648 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Slc6a1P31648 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a1P31648 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a1P31648 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Slc6a1P31648 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a1P31648 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a1P31648 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a1P31648 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a1P31648 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc6a1P31648 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.7□□□□□ -0.38
Slc6a1P31648 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Gm15794-201ENSMUST00000120182 631 ntBASIC12.7□□□□□ -0.38
Slc6a1P31648 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Rprl3-201ENSMUST00000157400 290 ntBASIC12.7□□□□□ -0.38
Slc6a1P31648 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.7□□□□□ -0.38
Slc6a1P31648 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.7□□□□□ -0.38
Slc6a1P31648 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.7□□□□□ -0.38
Slc6a1P31648 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Slc6a1P31648 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc6a1P31648 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.69□□□□□ -0.38
Slc6a1P31648 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a1P31648 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a1P31648 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc6a1P31648 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Slc6a1P31648 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms